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B3GAT1 beta-1,3-glucuronyltransferase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 466859, updated on 17-Aug-2024

Summary

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Official Symbol
B3GAT1provided by VGNC
Official Full Name
beta-1,3-glucuronyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:48891
Locus tag
CK820_G0015361
See related
Ensembl:ENSPTRG00000004501
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See B3GAT1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (136296156..136378634, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (135525286..135594256, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase family member 8 Neighboring gene galactosidase beta 1 like 3 Neighboring gene galactosidase beta 1 like 2 Neighboring gene uncharacterized LOC100614081

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
Names
UDP-GlcUA:glycoprotein beta-1,3-glucuronyltransferase
glcAT-P
glcUAT-P
glucuronosyltransferase P
NP_001026790.1
XP_009422786.2
XP_009422788.1
XP_016775374.1
XP_024202600.1
XP_063638662.1
XP_063638663.1
XP_063638664.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031619.1 → NP_001026790.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1

    See identical proteins and their annotated locations for NP_001026790.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ888974
    UniProtKB/Swiss-Prot
    Q5CB04
    Conserved Domains (1) summary
    pfam03360
    Location:105 → 311
    Glyco_transf_43; Glycosyltransferase family 43

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    136296156..136378634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063782592.1 → XP_063638662.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

  2. XM_009424513.5 → XP_009422788.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_009422788.1

    Conserved Domains (1) summary
    pfam03360
    Location:118 → 328
    Glyco_transf_43; Glycosyltransferase family 43

  3. XM_063782594.1 → XP_063638664.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2J8N0U8, A0A6D2X7I3, H2RAM6

  4. XM_016919885.4 → XP_016775374.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

  5. XM_024346832.3 → XP_024202600.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

    Conserved Domains (1) summary
    pfam03360
    Location:118 → 328
    Glyco_transf_43; Glycosyltransferase family 43

  6. XM_063782593.1 → XP_063638663.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X2

  7. XM_009424511.5 → XP_009422786.2  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 isoform X1

RNA

  1. XR_010147102.1 RNA Sequence

  2. XR_010147101.1 RNA Sequence

  3. XR_010147103.1 RNA Sequence

  4. XR_010147100.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5CB04.1 GenPept UniProtKB/Swiss-Prot:Q5CB04

Gene LinkOut

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Molecular Biology Databases
Research Materials