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BEX1 brain expressed X-linked 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 465773, updated on 17-Aug-2024

Summary

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Official Symbol
BEX1provided by VGNC
Official Full Name
brain expressed X-linked 1provided by VGNC
Primary source
VGNC:VGNC:1408
Locus tag
CK820_G0053081
See related
Ensembl:ENSPTRG00000022120
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See BEX1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (100670524..100672062, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (100666607..100668174, complement)

Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor associated sorting protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene G protein-coupled receptor associated sorting protein family member 3 Neighboring gene RAB40A like Neighboring gene zinc finger protein 770-like Neighboring gene nuclear RNA export factor 3 Neighboring gene CKLF-like MARVEL transmembrane domain-containing protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein BEX1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    100670524..100672062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_521190.7 → XP_521190.1  protein BEX1

    UniProtKB/TrEMBL
    A0A2J8IU84, A0A6D2XIK1, H2QYX8
    Related
    ENSPTRP00000038054.4
    Conserved Domains (1) summary
    pfam04538
    Location:14 → 121
    BEX; Brain expressed X-linked like family
Nucleotide Protein
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