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NKD1 NKD inhibitor of WNT signaling pathway 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 465164, updated on 17-Aug-2024

Summary

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Official Symbol
NKD1provided by VGNC
Official Full Name
NKD inhibitor of WNT signaling pathway 1provided by VGNC
Primary source
VGNC:VGNC:9388
Locus tag
CK820_G0016759
See related
Ensembl:ENSPTRG00000008104
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See NKD1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (48519916..48620531)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (48519813..48620429)

Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene bromodomain containing 7 Neighboring gene uncharacterized LOC107968734 Neighboring gene sorting nexin 20 Neighboring gene nucleotide binding oligomerization domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein naked cuticle homolog 1
Names
NKD1, WNT signaling pathway inhibitor
naked cuticle homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    48519916..48620531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016929817.4 → XP_016785306.1  protein naked cuticle homolog 1

    UniProtKB/TrEMBL
    A0A2J8MX14, A0A6D2WKT2, H2RA69
    Related
    ENSPTRP00000053564.3
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials