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TJP2 tight junction protein 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 464514, updated on 17-Aug-2024

Summary

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Official Symbol
TJP2provided by VGNC
Official Full Name
tight junction protein 2provided by VGNC
Primary source
VGNC:VGNC:4877
Locus tag
CK820_G0017728
See related
Ensembl:ENSPTRG00000021005
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See TJP2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (59642849..59776059)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (59092655..59225453, complement)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene protein kinase cAMP-activated catalytic subunit gamma Neighboring gene frataxin Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene amyloid beta precursor protein binding family A member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2
Names
tight junction protein 2 (zona occludens 2)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    59642849..59776059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009456699.5 → XP_009454974.3  tight junction protein ZO-2 isoform X5

  2. XM_063788536.1 → XP_063644606.1  tight junction protein ZO-2 isoform X12

  3. XM_063788535.1 → XP_063644605.1  tight junction protein ZO-2 isoform X12

  4. XM_009456698.3 → XP_009454973.3  tight junction protein ZO-2 isoform X4

  5. XM_054658162.1 → XP_054514137.1  tight junction protein ZO-2 isoform X5

  6. XM_003312128.5 → XP_003312176.3  tight junction protein ZO-2 isoform X10

  7. XM_520061.7 → XP_520061.5  tight junction protein ZO-2 isoform X2

  8. XM_054658163.2 → XP_054514138.1  tight junction protein ZO-2 isoform X7

  9. XM_009456697.4 → XP_009454972.3  tight junction protein ZO-2 isoform X3

  10. XM_054658166.2 → XP_054514141.1  tight junction protein ZO-2 isoform X11

  11. XM_063788534.1 → XP_063644604.1  tight junction protein ZO-2 isoform X8

  12. XM_063788533.1 → XP_063644603.1  tight junction protein ZO-2 isoform X5

  13. XM_054658161.2 → XP_054514136.1  tight junction protein ZO-2 isoform X5

  14. XM_009456696.5 → XP_009454971.3  tight junction protein ZO-2 isoform X1

  15. XM_003312129.6 → XP_003312177.3  tight junction protein ZO-2 isoform X6

  16. XM_054658165.2 → XP_054514140.1  tight junction protein ZO-2 isoform X9

Nucleotide Protein
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