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MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 463145, updated on 17-Aug-2024

Summary

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Official Symbol
MICAL1provided by VGNC
Official Full Name
microtubule associated monooxygenase, calponin and LIM domain containing 1provided by VGNC
Primary source
VGNC:VGNC:8171
Locus tag
CK820_G0000554
See related
Ensembl:ENSPTRG00000018486
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MICAL1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (121361116..121373244, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (121359599..121381717, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase like 6 Neighboring gene sphingomyelin phosphodiesterase 2 Neighboring gene zinc finger and BTB domain containing 24 Neighboring gene adenylate kinase 9 Neighboring gene FIG4 phosphoinositide 5-phosphatase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein-methionine sulfoxide oxidase MICAL1; F-actin-monooxygenase MICAL1
Names
microtubule associated monoxygenase, calponin and LIM domain containing 1
XP_001153612.2
XP_024213128.2
XP_054542828.1
XP_063668636.1
XP_063668637.1
XP_063668638.1
XP_063668639.1
XP_063668640.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    121361116..121373244 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001153612.6 → XP_001153612.2  F-actin-monooxygenase MICAL1 isoform X3

  2. XM_054686853.2 → XP_054542828.1  F-actin-monooxygenase MICAL1 isoform X4

  3. XM_063812568.1 → XP_063668638.1  F-actin-monooxygenase MICAL1 isoform X2

  4. XM_063812566.1 → XP_063668636.1  F-actin-monooxygenase MICAL1 isoform X1

  5. XM_063812570.1 → XP_063668640.1  F-actin-monooxygenase MICAL1 isoform X4

  6. XM_024357360.3 → XP_024213128.2  F-actin-monooxygenase MICAL1 isoform X3

  7. XM_063812567.1 → XP_063668637.1  F-actin-monooxygenase MICAL1 isoform X1

  8. XM_063812569.1 → XP_063668639.1  F-actin-monooxygenase MICAL1 isoform X3

Nucleotide Protein
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