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FILIP1 filamin A interacting protein 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462828, updated on 17-Aug-2024

Summary

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Official Symbol
FILIP1provided by VGNC
Official Full Name
filamin A interacting protein 1provided by VGNC
Primary source
VGNC:VGNC:2833
Locus tag
CK820_G0000942
See related
Ensembl:ENSPTRG00000018356
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See FILIP1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (87256455..87456640, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (87254939..87455089, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129144292 Neighboring gene cytochrome c oxidase subunit 7A2 Neighboring gene transmembrane protein 30A Neighboring gene high mobility group protein B1-like Neighboring gene uncharacterized LOC107975204 Neighboring gene uncharacterized LOC107975203 Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC104006890 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1-like Neighboring gene U1 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene SUMO specific peptidase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
filamin-A-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    87256455..87456640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001144104.8 → XP_001144104.1  filamin-A-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8PVU0, A0A2J8PVU5
    Conserved Domains (3) summary
    pfam09727
    Location:74 → 255
    CortBP2; Cortactin-binding protein-2
    cl25496
    Location:833 → 1156
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25732
    Location:205 → 738
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_016955868.4 → XP_016811357.1  filamin-A-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A2J8PVU0

  3. XM_009451565.5 → XP_009449840.1  filamin-A-interacting protein 1 isoform X1

    See identical proteins and their annotated locations for XP_009449840.1

    UniProtKB/TrEMBL
    A0A2J8PVU0, A0A2J8PVV1, A0A6D2VZD1, H2QTA6
    Related
    ENSPTRP00000031373.2
    Conserved Domains (3) summary
    pfam09727
    Location:74 → 255
    CortBP2; Cortactin-binding protein-2
    cl25496
    Location:916 → 1210
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25732
    Location:205 → 738
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_001144185.6 → XP_001144185.1  filamin-A-interacting protein 1 isoform X1

    See identical proteins and their annotated locations for XP_001144185.1

    UniProtKB/TrEMBL
    A0A2J8PVU0, A0A2J8PVV1, A0A6D2VZD1, H2QTA6
    Conserved Domains (3) summary
    pfam09727
    Location:74 → 255
    CortBP2; Cortactin-binding protein-2
    cl25496
    Location:916 → 1210
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
    cl25732
    Location:205 → 738
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_009451566.5 → XP_009449841.1  filamin-A-interacting protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A2J8PVV9
    Conserved Domains (3) summary
    pfam05010
    Location:102 → 328
    TACC; Transforming acidic coiled-coil-containing protein (TACC)
    pfam06156
    Location:138 → 210
    DUF972; Protein of unknown function (DUF972)
    cl23720
    Location:177 → 281
    RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)
Nucleotide Protein
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