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AGOS_AGR407C AGR407Cp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4623377, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AGR407C
Gene description
AGR407Cp
Locus tag
AGOS_AGR407C
Gene type
protein coding
RNA name
AGR407Cp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AGR407C
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Genomic context

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See AGOS_AGR407C in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_005788.4 (1792426..1793607, complement)

Chromosome VII - NC_005788.4Genomic Context describing neighboring genes Neighboring gene AGR405Cp Neighboring gene AGR406Cp Neighboring gene AGR408Wp Neighboring gene tRNA-Val

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005788.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aspartic-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AGR407Cp
NP_987073.2
  • Non-syntenic homolog of Saccharomyces cerevisiae YPL154C (PEP4)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005788.4 Reference assembly

    Range
    1792426..1793607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_212135.2 → NP_987073.2  AGR407Cp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_987073.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q74Z00
    Conserved Domains (2) summary
    pfam00026
    Location:82 → 392
    Asp; Eukaryotic aspartyl protease
    cl11403
    Location:73 → 391
    pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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