U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AGOS_AFL022W AFL022Wp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4621759, updated on 16-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
AGOS_AFL022W
Gene description
AFL022Wp
Locus tag
AGOS_AFL022W
Gene type
protein coding
RNA name
AFL022Wp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AFL022W
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AGOS_AFL022W in Genome Data Viewer
Location:
chromosome: VI
Exon count:
1
Sequence:
Chromosome: VI; NC_005787.5 (398785..399900)

Chromosome VI - NC_005787.5Genomic Context describing neighboring genes Neighboring gene AFL024Wp Neighboring gene AFL023Cp Neighboring gene AFL021Cp Neighboring gene AFL020Wp

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_005787.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Arp2/3 protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
AFL022Wp
NP_985526.1
  • Syntenic homolog of Saccharomyces cerevisiae YBR234C (ARC40)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005787.5 Reference assembly

    Range
    398785..399900
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_210880.1 → NP_985526.1  AFL022Wp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_985526.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q754U3
    Conserved Domains (3) summary
    COG2319
    Location:2 → 279
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:15 → 53
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:12 → 173
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials