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AGOS_AER106C AER106Cp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4621171, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AER106C
Gene description
AER106Cp
Locus tag
AGOS_AER106C
Gene type
protein coding
RNA name
AER106Cp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AER106C
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Genomic context

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See AGOS_AER106C in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_005786.2 (836668..837909, complement)

Chromosome V - NC_005786.2Genomic Context describing neighboring genes Neighboring gene AER104Wp Neighboring gene AER105Wp Neighboring gene AER107Wp Neighboring gene AER108Cp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005786.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Atg1/ULK1 kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AER106Cp
NP_984966.1
  • Syntenic homolog of Saccharomyces cerevisiae YLR423C (ATG17)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005786.2 Reference assembly

    Range
    836668..837909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_210320.1 → NP_984966.1  AER106Cp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_984966.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q757A7
    Conserved Domains (1) summary
    pfam04108
    Location:13 → 400
    APG17; Autophagy protein Apg17
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q757A7.1

Gene LinkOut

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Molecular Biology Databases
Research Materials