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AGOS_AER080W AER080Wp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4621144, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AER080W
Gene description
AER080Wp
Locus tag
AGOS_AER080W
Gene type
protein coding
RNA name
AER080Wp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AER080W
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Genomic context

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See AGOS_AER080W in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_005786.2 (781322..784420)

Chromosome V - NC_005786.2Genomic Context describing neighboring genes Neighboring gene AER078Wp Neighboring gene AER079Cp Neighboring gene AER081Cp Neighboring gene AER082Wp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005786.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in fungal-type vacuole membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AER080Wp
NP_984940.1
  • Syntenic homolog of Saccharomyces cerevisiae YDL077C (VAM6)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005786.2 Reference assembly

    Range
    781322..784420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_210294.1 → NP_984940.1  AER080Wp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_984940.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q757D3
    Conserved Domains (2) summary
    pfam10366
    Location:594 → 702
    Vps39_1; Vacuolar sorting protein 39 domain 1
    pfam10367
    Location:890 → 1002
    Vps39_2; Vacuolar sorting protein 39 domain 2
Nucleotide Protein
Heading Accession and Version

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