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RPS3A ribosomal protein S3A [ Pan troglodytes (chimpanzee) ]

Gene ID: 461536, updated on 29-Mar-2024

Summary

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Gene symbol
RPS3A
Gene description
ribosomal protein S3A
Locus tag
CK820_G0016915
See related
Ensembl:ENSPTRG00000046168
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See RPS3A in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (152885262..152890553)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (152843871..152849955)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene LPS responsive beige-like anchor protein Neighboring gene protein archease-like Neighboring gene adenylate kinase 4, mitochondrial-like Neighboring gene small nucleolar RNA SNORD73 Neighboring gene small nucleolar RNA SNORD73 Neighboring gene SH3 domain containing 19 Neighboring gene U6 spliceosomal RNA Neighboring gene serine protease 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S3a; small ribosomal subunit protein eS1
XP_001153182.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    152885262..152890553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001153182.7 → XP_001153182.1  small ribosomal subunit protein eS1

    See identical proteins and their annotated locations for XP_001153182.1

    UniProtKB/TrEMBL
    A0A2I3RHI1, A0A2I3SS60, A0A2J8MUI6, A0A663DGI6
    Related
    ENSPTRP00000064114.1
    Conserved Domains (1) summary
    pfam01015
    Location:21 → 221
    Ribosomal_S3Ae; Ribosomal S3Ae family
Nucleotide Protein
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