LRP2 LDL receptor related protein 2 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: LRP2provided by VGNC
Official Full Name: LDL receptor related protein 2provided by VGNC
Primary source: VGNC:VGNC:1990
Locus tag: CK820_G0001430
See related: Ensembl:ENSPTRG00000012613
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 80

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	13	NC_072411.2 (71169699..71402376, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	2B	NC_072400.1 (71169659..71402336, complement)

Chromosome 13 - NC_072411.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

WI-17537 (e-PCR)
- UniSTS:26882

SHGC-80045 (e-PCR)
- UniSTS:101654

LRP2_7816 (e-PCR)
- UniSTS:467751

G32722 (e-PCR)
- UniSTS:117304

D2S2879 (e-PCR)
- UniSTS:1344

A009P03 (e-PCR)
- UniSTS:2385

D2S1416 (e-PCR)
- UniSTS:75117

RH124065 (e-PCR)
- UniSTS:138872

RH45139 (e-PCR)
- UniSTS:26027

RH123671 (e-PCR)
- UniSTS:138681

RH120397 (e-PCR)
- UniSTS:132540

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info	PubMed
enables hormone binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in receptor-mediated endocytosis	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in apical plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
part_of receptor complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: low-density lipoprotein receptor-related protein 2

Names: low density lipoprotein receptor-related protein 2; low density lipoprotein-related protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

71169699..71402376 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_054679929.2 → XP_054535904.1 low-density lipoprotein receptor-related protein 2 isoform X2

UniProtKB/TrEMBL

H2QIY0
XM_515882.7 → XP_515882.5 low-density lipoprotein receptor-related protein 2 isoform X1

UniProtKB/TrEMBL

H2QIY0
XM_054679933.2 → XP_054535908.1 low-density lipoprotein receptor-related protein 2 isoform X5

UniProtKB/TrEMBL

A0A2I3T8F6
XM_054679930.2 → XP_054535905.1 low-density lipoprotein receptor-related protein 2 isoform X3

UniProtKB/TrEMBL

H2QIY0
XM_054679932.1 → XP_054535907.1 low-density lipoprotein receptor-related protein 2 isoform X4

UniProtKB/TrEMBL

H2QIY0