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AMC88_RS21930 alpha-L-rhamnosidase [ Rhizobium phaseoli ]

Gene ID: 45959676, updated on 6-Mar-2024

Summary

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Gene symbol
AMC88_RS21930
Gene description
alpha-L-rhamnosidase
Locus tag
AMC88_RS21930
Gene type
protein coding
Organism
Rhizobium phaseoli (strain: R650, biovar: phaseoli, nat-host: Phaseolus vulgaris)
Lineage
Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Old locus tag
AMC88_PA00049
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Genomic context

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Location:
plasmid: pRphaR650a

NZ_CP013533.1Genomic Context describing neighboring genes Neighboring gene carbohydrate ABC transporter permease Neighboring gene sugar ABC transporter permease Neighboring gene extracellular solute-binding protein Neighboring gene LacI family DNA-binding transcriptional regulator Neighboring gene dihydrodipicolinate synthase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP013533.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
alpha-L-rhamnosidase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP013533.1 Reference assembly

    Range
    46421..48742 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_064825910.1 MULTISPECIES: alpha-L-rhamnosidase [Rhizobium]

    UniProtKB/TrEMBL
    A0A192TJF4
    Conserved Domains (4) summary
    pfam05592
    Location:215 → 296
    Bac_rhamnosid; Bacterial alpha-L-rhamnosidase concanavalin-like domain
    pfam17390
    Location:679 → 732
    Bac_rhamnosid_C; Bacterial alpha-L-rhamnosidase C-terminal domain
    pfam08531
    Location:52 → 204
    Bac_rhamnosid_N; Alpha-L-rhamnosidase N-terminal domain
    pfam17389
    Location:318 → 673
    Bac_rhamnosid6H; Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain
Nucleotide Protein
Heading Accession and Version