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LMAN2L lectin, mannose binding 2 like [ Pan troglodytes (chimpanzee) ]

Gene ID: 459552, updated on 10-Oct-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
Locus tag
CK820_G0051155
See related
Ensembl:ENSPTRG00000012239
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 12
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (26329494..26363686)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (96135306..96169498, complement)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134807871 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene microRNA mir-3127 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    26329494..26363686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001150690.5 → XP_001150690.2  VIP36-like protein isoform X1

  2. XM_063789577.1 → XP_063645647.1  VIP36-like protein isoform X4

  3. XM_063789578.1 → XP_063645648.1  VIP36-like protein isoform X4

  4. XM_063789579.1 → XP_063645649.1  VIP36-like protein isoform X5

  5. XM_063789580.1 → XP_063645650.1  VIP36-like protein isoform X5

  6. XM_016949002.3 → XP_016804491.1  VIP36-like protein isoform X5

  7. XM_515742.7 → XP_515742.4  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A2J8PXU4, A0A6D2XK03, H2QID3

  8. XM_063789575.1 → XP_063645645.1  VIP36-like protein isoform X3

  9. XM_063789576.1 → XP_063645646.1  VIP36-like protein isoform X3

RNA

  1. XR_001715932.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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