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GNLY granulysin [ Pan troglodytes (chimpanzee) ]

Gene ID: 459370, updated on 17-Aug-2024

Summary

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Official Symbol
GNLYprovided by VGNC
Official Full Name
granulysinprovided by VGNC
Primary source
VGNC:VGNC:267
Locus tag
CK820_G0032499
See related
Ensembl:ENSPTRG00000012143
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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See GNLY in Genome Data Viewer
Location:
chromosome: 12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (37055920..37060598, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (85792624..85797308)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 5 Neighboring gene atonal bHLH transcription factor 8 Neighboring gene surfactant protein B Neighboring gene ubiquitin specific peptidase 39 Neighboring gene chromosome 2A C2orf68 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in killing of cells of another organism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytolytic granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granulysin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    37055920..37060598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054678568.2 → XP_054534543.1  granulysin isoform X1

  2. XM_054678569.2 → XP_054534544.1  granulysin isoform X2

  3. XM_003309080.7 → XP_003309128.2  granulysin isoform X3

  4. XM_001168573.6 → XP_001168573.2  granulysin isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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