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SULF2 sulfatase 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 458309, updated on 10-Oct-2024

Summary

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Official Symbol
SULF2provided by VGNC
Official Full Name
sulfatase 2provided by VGNC
Primary source
VGNC:VGNC:57995
Locus tag
CK820_G0019922
See related
Ensembl:ENSPTRG00000050032
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SULF2 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 21 NC_072419.2 (53923608..54053400, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 20 NC_072418.1 (53979099..54108892, complement)

Chromosome 21 - NC_072419.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene nuclear receptor coactivator 3 Neighboring gene uncharacterized LOC134809181 Neighboring gene uncharacterized LOC107970043 Neighboring gene U7 small nuclear RNA Neighboring gene spermidine synthase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycosaminoglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glomerular basement membrane development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heparan sulfate proteoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of vascular endothelial growth factor production IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular sulfatase Sulf-2
XP_016793568.1
XP_016793569.1
XP_016793570.1
XP_024208029.1
XP_054530993.1
XP_054530994.1
XP_054530995.1
XP_063659157.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072419.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    53923608..54053400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054675020.2 → XP_054530995.1  extracellular sulfatase Sulf-2 isoform X2

  2. XM_016938080.4 → XP_016793569.1  extracellular sulfatase Sulf-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8MJI4, A0A2J8MJI8, A0A6D2VVM9, K7DH09
    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:529 → 661
    DUF3740; Sulfatase protein
    cl23718
    Location:749 → 798
    ALP_like; alkaline phosphatases and sulfatases

  3. XM_016938079.4 → XP_016793568.1  extracellular sulfatase Sulf-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8MJI4, A0A2J8MJI8, A0A6D2VVM9, K7DH09
    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:529 → 661
    DUF3740; Sulfatase protein
    cl23718
    Location:749 → 798
    ALP_like; alkaline phosphatases and sulfatases

  4. XM_054675019.2 → XP_054530994.1  extracellular sulfatase Sulf-2 isoform X2

  5. XM_024352261.3 → XP_024208029.1  extracellular sulfatase Sulf-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8MJI4, A0A2J8MJI8, A0A6D2VVM9, K7DH09
    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:529 → 661
    DUF3740; Sulfatase protein
    cl23718
    Location:749 → 798
    ALP_like; alkaline phosphatases and sulfatases

  6. XM_063803087.1 → XP_063659157.1  extracellular sulfatase Sulf-2 isoform X2

  7. XM_054675018.1 → XP_054530993.1  extracellular sulfatase Sulf-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8MJI4, A0A6D2VVM9, K7DH09

  8. XM_016938081.4 → XP_016793570.1  extracellular sulfatase Sulf-2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8MJI4, A0A2J8MJI8, A0A6D2VVM9, K7DH09
    Related
    ENSPTRP00000081701.1
    Conserved Domains (3) summary
    cd16147
    Location:43 → 385
    G6S; glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1)
    pfam12548
    Location:529 → 661
    DUF3740; Sulfatase protein
    cl23718
    Location:749 → 798
    ALP_like; alkaline phosphatases and sulfatases

RNA

  1. XR_010154266.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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