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LBR lamin B receptor [ Pan troglodytes (chimpanzee) ]

Gene ID: 457776, updated on 17-Aug-2024

Summary

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Official Symbol
LBRprovided by VGNC
Official Full Name
lamin B receptorprovided by VGNC
Primary source
VGNC:VGNC:1293
Locus tag
CK820_G0040472
See related
Ensembl:ENSPTRG00000002036
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See LBR in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (23865416..23892037)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (207431300..207457898, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104004758 Neighboring gene ENAH actin regulator Neighboring gene dynein axonemal heavy chain 14 Neighboring gene uncharacterized LOC107970364 Neighboring gene cornichon family AMPA receptor auxiliary protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables delta14-sterol reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lamin-B receptor; delta(14)-sterol reductase LBR

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    23865416..23892037
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_514234.7 → XP_514234.2  delta(14)-sterol reductase LBR isoform X1

    See identical proteins and their annotated locations for XP_514234.2

    UniProtKB/TrEMBL
    A0A2J8K9H5, A0A6D2YAL5, H2Q178
    Conserved Domains (2) summary
    pfam09465
    Location:1 → 55
    LBR_tudor; Lamin-B receptor of TUDOR domain
    cl21511
    Location:205 → 615
    PEMT; Phospholipid methyltransferase

  2. XM_009441567.4 → XP_009439842.1  delta(14)-sterol reductase LBR isoform X2

    Conserved Domains (2) summary
    pfam09465
    Location:1 → 55
    LBR_tudor; Lamin-B receptor of TUDOR domain
    cl21511
    Location:205 → 573
    PEMT; Phospholipid methyltransferase

  3. XM_016939725.4 → XP_016795214.1  delta(14)-sterol reductase LBR isoform X1

    UniProtKB/TrEMBL
    A0A2J8K9H5, A0A6D2YAL5, H2Q178
    Related
    ENSPTRP00000003438.4
    Conserved Domains (2) summary
    pfam09465
    Location:1 → 55
    LBR_tudor; Lamin-B receptor of TUDOR domain
    cl21511
    Location:205 → 615
    PEMT; Phospholipid methyltransferase

RNA

  1. XR_010150187.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Research Materials