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THBS3 thrombospondin 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 457359, updated on 17-Aug-2024

Summary

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Official Symbol
THBS3provided by VGNC
Official Full Name
thrombospondin 3provided by VGNC
Primary source
VGNC:VGNC:1671
Locus tag
CK820_G0045160
See related
Ensembl:ENSPTRG00000001413
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (93986476..94000098)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (137349638..137362087, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene metaxin-1-like Neighboring gene lysosomal acid glucosylceramidase-like Neighboring gene metaxin 1 Neighboring gene uncharacterized LOC129137874 Neighboring gene microRNA mir-92b Neighboring gene mucin 1, cell surface associated

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thrombospondin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    93986476..94000098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063812692.1 → XP_063668762.1  thrombospondin-3 isoform X12

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  2. XM_063812689.1 → XP_063668759.1  thrombospondin-3 isoform X12

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  3. XM_063812693.1 → XP_063668763.1  thrombospondin-3 isoform X13

    UniProtKB/TrEMBL
    A0A2I3TBA9

  4. XM_063812681.1 → XP_063668751.1  thrombospondin-3 isoform X7

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  5. XM_054671818.2 → XP_054527793.1  thrombospondin-3 isoform X4

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  6. XM_054671847.2 → XP_054527822.1  thrombospondin-3 isoform X11

    UniProtKB/TrEMBL
    A0A2I3TBA9

  7. XM_054671821.2 → XP_054527796.1  thrombospondin-3 isoform X6

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  8. XM_001154764.7 → XP_001154764.2  thrombospondin-3 isoform X10

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  9. XM_054671861.2 → XP_054527836.1  thrombospondin-3 isoform X17

    UniProtKB/TrEMBL
    A0A2I3TDU9

  10. XM_016928527.4 → XP_016784016.2  thrombospondin-3 isoform X8

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  11. XM_054671819.2 → XP_054527794.1  thrombospondin-3 isoform X5

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  12. XM_054671810.2 → XP_054527785.1  thrombospondin-3 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  13. XM_054671816.2 → XP_054527791.1  thrombospondin-3 isoform X3

    UniProtKB/TrEMBL
    A0A2I3TBA9

  14. XM_054671841.2 → XP_054527816.1  thrombospondin-3 isoform X9

    UniProtKB/TrEMBL
    A0A2I3TBA9

  15. XM_016928506.4 → XP_016783995.2  thrombospondin-3 isoform X2

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  16. XM_054671831.2 → XP_054527806.1  thrombospondin-3 isoform X7

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  17. XM_063812690.1 → XP_063668760.1  thrombospondin-3 isoform X12

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  18. XM_054671822.2 → XP_054527797.1  thrombospondin-3 isoform X7

    UniProtKB/TrEMBL
    A0A2I3TJ39, A0A2J8Q2X8, A0A6D2VUG1

  19. XM_063812701.1 → XP_063668771.1  thrombospondin-3 isoform X16

  20. XM_054671855.1 → XP_054527830.1  thrombospondin-3 isoform X14

  21. XM_054671857.2 → XP_054527832.1  thrombospondin-3 isoform X15

    UniProtKB/TrEMBL
    A0A2I3RJG4, A0A2J8Q2T8, A0A6D2X3G6

  22. XM_063812694.1 → XP_063668764.1  thrombospondin-3 isoform X14

  23. XM_063812706.1 → XP_063668776.1  thrombospondin-3 isoform X16

RNA

  1. XR_010157808.1 RNA Sequence

  2. XR_010157809.1 RNA Sequence

  3. XR_010157805.1 RNA Sequence

Nucleotide Protein
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