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MCOLN1 mucolipin TRP cation channel 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 455656, updated on 17-Aug-2024

Summary

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Official Symbol
MCOLN1provided by VGNC
Official Full Name
mucolipin TRP cation channel 1provided by VGNC
Primary source
VGNC:VGNC:2317
Locus tag
CK820_G0050317
See related
Ensembl:ENSPTRG00000010392
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MCOLN1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (9934672..9946311)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (9934720..9946373)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene stabilizer of axonemal microtubules 5 Neighboring gene zinc finger protein 358 Neighboring gene patatin like phospholipase domain containing 6 Neighboring gene calmodulin regulated spectrin associated protein family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAADP-sensitive calcium-release channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mucolipin-1
Names
mucolipin 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    9934672..9946311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001152409.6 → XP_001152409.1  mucolipin-1 isoform X1

    See identical proteins and their annotated locations for XP_001152409.1

    UniProtKB/TrEMBL
    A0A2I3RL30, A0A2J8J686, A0A6D2YA85, H2QF64
    Related
    ENSPTRP00000065350.1
    Conserved Domains (1) summary
    cl27887
    Location:388 → 524
    PKD_channel; Polycystin cation channel

  2. XM_054673626.2 → XP_054529601.1  mucolipin-1 isoform X2

  3. XM_016934875.4 → XP_016790364.1  mucolipin-1 isoform X3

    UniProtKB/TrEMBL
    H2QF64
    Related
    ENSPTRP00000017677.4

RNA

  1. XR_010153520.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials