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ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 455144, updated on 17-Aug-2024

Summary

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Official Symbol
ANKFN1provided by VGNC
Official Full Name
ankyrin repeat and fibronectin type III domain containing 1provided by VGNC
Primary source
VGNC:VGNC:6335
Locus tag
CK820_G0020949
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See ANKFN1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (69276290..69630635)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (67460742..67815087)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 100 Neighboring gene phosphatidylcholine transfer protein Neighboring gene uncharacterized LOC129137736 Neighboring gene uncharacterized LOC107969082 Neighboring gene noggin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment of mitotic spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of establishment of bipolar cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and fibronectin type-III domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    69276290..69630635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016932606.4 → XP_016788095.2  ankyrin repeat and fibronectin type-III domain-containing protein 1 isoform X1

  2. XM_054671260.2 → XP_054527235.1  ankyrin repeat and fibronectin type-III domain-containing protein 1 isoform X2

  3. XM_063799882.1 → XP_063655952.1  ankyrin repeat and fibronectin type-III domain-containing protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials