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HEXD hexosaminidase D [ Pan troglodytes (chimpanzee) ]

Gene ID: 454992, updated on 10-Oct-2024

Summary

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Official Symbol
HEXDprovided by VGNC
Official Full Name
hexosaminidase Dprovided by VGNC
Primary source
VGNC:VGNC:9321
Locus tag
CK820_G0047916
See related
Ensembl:ENSPTRG00000009803
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
HEXDC
Orthologs
human mouse all
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Genomic context

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See HEXD in Genome Data Viewer
Location:
chromosome: 19
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (95782113..95806260)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (93966470..93990569)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene urotensin 2 receptor Neighboring gene 2-oxoglutarate and iron dependent oxygenase domain containing 3 Neighboring gene uncharacterized LOC134808915 Neighboring gene cytochrome b-245 chaperone 1 Neighboring gene nuclear prelamin A recognition factor Neighboring gene transfer RNA methionine (anticodon CAU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hexosaminidase D
Names
hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing
XP_024206544.2
XP_024206545.1
XP_024206546.1
XP_054526253.1
XP_063655521.1
XP_063655522.1
XP_063655523.1
XP_063655524.1
XP_063655525.1
XP_063655526.1
XP_063655527.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    95782113..95806260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054670278.2 → XP_054526253.1  hexosaminidase D isoform X2

  2. XM_024350776.3 → XP_024206544.2  hexosaminidase D isoform X1

  3. XM_024350777.3 → XP_024206545.1  hexosaminidase D isoform X3

    UniProtKB/TrEMBL
    A0A2J8JFD8, A0A2J8JFE2
    Conserved Domains (1) summary
    cd06565
    Location:9 → 323
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  4. XM_024350778.3 → XP_024206546.1  hexosaminidase D isoform X5

    UniProtKB/TrEMBL
    A0A2J8JFD8
    Conserved Domains (1) summary
    cd06565
    Location:9 → 323
    GH20_GcnA-like; Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine ...

  5. XM_063799456.1 → XP_063655526.1  hexosaminidase D isoform X7

  6. XM_063799453.1 → XP_063655523.1  hexosaminidase D isoform X4

  7. XM_063799455.1 → XP_063655525.1  hexosaminidase D isoform X6

  8. XM_063799452.1 → XP_063655522.1  hexosaminidase D isoform X3

    UniProtKB/TrEMBL
    A0A2J8JFE2

  9. XM_063799451.1 → XP_063655521.1  hexosaminidase D isoform X1

  10. XM_063799457.1 → XP_063655527.1  hexosaminidase D isoform X7

  11. XM_063799454.1 → XP_063655524.1  hexosaminidase D isoform X6

RNA

  1. XR_010153168.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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