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POLDIP2 DNA polymerase delta interacting protein 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 454525, updated on 17-Aug-2024

Summary

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Official Symbol
POLDIP2provided by VGNC
Official Full Name
DNA polymerase delta interacting protein 2provided by VGNC
Primary source
VGNC:VGNC:57863
Locus tag
CK820_G0028409
See related
Ensembl:ENSPTRG00000051371
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
TNFAIP1
Orthologs
human mouse all
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Genomic context

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See POLDIP2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (39226968..39237933)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (37411424..37422390)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene SEBOX homeobox Neighboring gene transmembrane protein 199 Neighboring gene TNF alpha induced protein 1 Neighboring gene intraflagellar transport 20 Neighboring gene transmembrane protein 97 Neighboring gene keratin, type I cytoskeletal 18-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in error-free translesion synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polymerase delta-interacting protein 2
Names
polymerase (DNA) delta interacting protein 2
polymerase (DNA-directed), delta interacting protein 2
tumor necrosis factor, alpha-induced protein 1 (endothelial)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    39226968..39237933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016932192.4 → XP_016787681.1  polymerase delta-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3TLE4, A0A2J8LHZ2, A0A6D2XX31
    Related
    ENSPTRP00000090055.1
    Conserved Domains (2) summary
    cl01119
    Location:234 → 355
    DUF525; ApaG domain
    cl01548
    Location:74 → 200
    YccV-like; Hemimethylated DNA-binding protein YccV like

  2. XM_016932191.4 → XP_016787680.1  polymerase delta-interacting protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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