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CILP cartilage intermediate layer protein [ Pan troglodytes (chimpanzee) ]

Gene ID: 453514, updated on 17-Aug-2024

Summary

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Official Symbol
CILPprovided by VGNC
Official Full Name
cartilage intermediate layer proteinprovided by VGNC
Primary source
VGNC:VGNC:1618
Locus tag
CK820_G0008292
See related
Ensembl:ENSPTRG00000007177
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CILP in Genome Data Viewer
Location:
chromosome: 16
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (57189821..57205094, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (57164679..57184935, complement)

Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene programmed cell death 7 Neighboring gene caseinolytic mitochondrial matrix peptidase chaperone subunit X Neighboring gene U6 spliceosomal RNA Neighboring gene poly(ADP-ribose) polymerase family member 16 Neighboring gene small nucleolar RNA SNORA24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cartilage intermediate layer protein 1
Names
cartilage intermediate layer protein, nucleotide pyrophosphohydrolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    57189821..57205094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_510481.9 → XP_510481.3  cartilage intermediate layer protein 1

    UniProtKB/TrEMBL
    A0A2J8NRF0, A0A6D2Y374, H2Q9M0
Nucleotide Protein
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