TMTC2 transmembrane O-mannosyltransferase targeting cadherins 2 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: TMTC2provided by VGNC
Official Full Name: transmembrane O-mannosyltransferase targeting cadherins 2provided by VGNC
Primary source: VGNC:VGNC:13482
Locus tag: CK820_G0020241
See related: Ensembl:ENSPTRG00000005268
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	10	NC_072408.2 (89495633..89942496)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	12	NC_072410.1 (88113494..88560165)

Chromosome 10 - NC_072408.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

RH101927 (e-PCR)
- UniSTS:96262

G59406 (e-PCR)
- UniSTS:136718

SHGC-68557 (e-PCR)
- UniSTS:100636

RH68611 (e-PCR)
- UniSTS:22830

D12S1981 (e-PCR)
- UniSTS:82999

SHGC-68374 (e-PCR)
- UniSTS:95553

RH122415 (e-PCR)
- UniSTS:135285

D12S1670 (e-PCR)
- UniSTS:59511

G64859 (e-PCR)
- UniSTS:164758

STS-M79221 (e-PCR)
- UniSTS:22986

RH123822 (e-PCR)
- UniSTS:136143

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables mannosyltransferase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein O-linked mannosylation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: protein O-mannosyl-transferase TMTC2

Names: transmembrane and tetratricopeptide repeat containing 2

XP_016779414.2

EC 2.4.1.109

XP_016779415.2

EC 2.4.1.109

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072408.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

89495633..89942496

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_016923925.4 → XP_016779414.2 protein O-mannosyl-transferase TMTC2 isoform X1

UniProtKB/TrEMBL

K7D9Y3
XM_016923926.4 → XP_016779415.2 protein O-mannosyl-transferase TMTC2 isoform X2