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def peptide deformylase [ Citrobacter koseri ATCC BAA-895 ]

Gene ID: 45138225, updated on 22-Apr-2024

Summary

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Gene symbol
def
Gene description
peptide deformylase
Locus tag
CKO_RS20045
Gene type
protein coding
Organism
Citrobacter koseri ATCC BAA-895 (strain: ATCC BAA-895)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Citrobacter
Old locus tag
CKO_04699
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Genomic context

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Sequence:
NC_009792.1 (4332036..4332545)

NC_009792.1Genomic Context describing neighboring genes Neighboring gene L-threonylcarbamoyladenylate synthase type 1 TsaC Neighboring gene topoisomerase DNA-binding C4 zinc finger domain-containing protein Neighboring gene DUF494 family protein Smg Neighboring gene DNA-protecting protein DprA Neighboring gene methionyl-tRNA formyltransferase Neighboring gene 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009792.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion. Meinnel T, et al. J Mol Biol, 1997 Apr 4. PMID 9126850

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
peptide deformylase
WP_012135417.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009792.1 Reference assembly

    Range
    4332036..4332545
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012135417.1 MULTISPECIES: peptide deformylase [Citrobacter]

    UniProtKB/Swiss-Prot
    A8AQI1
    Conserved Domains (1) summary
    PRK00150
    Location:1 → 163
    def; peptide deformylase; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A8AQI1.1

Gene LinkOut

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