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IL1RAPL1 interleukin 1 receptor accessory protein like 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450116, updated on 17-Aug-2024

Summary

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Official Symbol
IL1RAPL1provided by VGNC
Official Full Name
interleukin 1 receptor accessory protein like 1provided by VGNC
Primary source
VGNC:VGNC:55718
Locus tag
CK820_G0033298
See related
Ensembl:ENSPTRG00000021762
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See IL1RAPL1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (29164686..30529944)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (29160235..30537634)

Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129138653 Neighboring gene microRNA mir-6134 Neighboring gene histone H3.3A-like Neighboring gene small nucleolar RNA SNORD74 Neighboring gene 5S ribosomal RNA Neighboring gene U2 spliceosomal RNA Neighboring gene phosphatidylinositol-glycan biosynthesis class F protein-like Neighboring gene MAGE family member B2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene diversity patterns at 10 X-chromosomal loci in humans and chimpanzees. Kitano T, et al. Mol Biol Evol, 2003 Aug. PMID 12777533

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interleukin-1 receptor accessory protein-like 1
Names
IL-1-RAPL-1
IL-1RAPL-1
IL1RAPL-1
X-linked interleukin-1 receptor accessory protein-like 1
oligophrenin-4
NP_001009038.1
XP_009437156.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009038.1 → NP_001009038.1  interleukin-1 receptor accessory protein-like 1 precursor

    See identical proteins and their annotated locations for NP_001009038.1

    Status: PROVISIONAL

    Source sequence(s)
    AB102651
    UniProtKB/Swiss-Prot
    P60029
    UniProtKB/TrEMBL
    A0A2J8L3A8
    Related
    ENSPTRP00000037316.4, ENSPTRT00000040384.4
    Conserved Domains (4) summary
    cd05896
    Location:32 → 135
    Ig1_IL1RAPL-1_like; First immunoglobulin (Ig)-like domain of X-linked interleukin-1 receptor accessory protein-like 1 (IL1RAPL-1)
    smart00408
    Location:260 → 341
    IGc2; Immunoglobulin C-2 Type
    pfam01582
    Location:405 → 559
    TIR; TIR domain
    cl11960
    Location:148 → 239
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    29164686..30529944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009438881.5 → XP_009437156.1  interleukin-1 receptor accessory protein-like 1 isoform X1

    See identical proteins and their annotated locations for XP_009437156.1

    UniProtKB/Swiss-Prot
    P60029
    UniProtKB/TrEMBL
    A0A2J8L3A8
    Conserved Domains (4) summary
    cd05896
    Location:32 → 135
    Ig1_IL1RAPL-1_like; First immunoglobulin (Ig)-like domain of X-linked interleukin-1 receptor accessory protein-like 1 (IL1RAPL-1)
    smart00408
    Location:260 → 341
    IGc2; Immunoglobulin C-2 Type
    pfam01582
    Location:405 → 559
    TIR; TIR domain
    cl11960
    Location:148 → 239
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P60029.1 GenPept UniProtKB/Swiss-Prot:P60029

Gene LinkOut

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