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def peptide deformylase [ Clostridium acetobutylicum DSM 1731 ]

Gene ID: 44998217, updated on 12-Apr-2023

Summary

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Gene symbol
def
Gene description
peptide deformylase
Locus tag
SMB_RS08870
Gene type
protein coding
Organism
Clostridium acetobutylicum DSM 1731 (strain: DSM 1731, culture-collection: DSM:1731)
Lineage
Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium
Old locus tag
SMB_G1747
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Genomic context

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Sequence:
NC_015687.1 (1873149..1873601)

NC_015687.1Genomic Context describing neighboring genes Neighboring gene bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC Neighboring gene primosomal protein N' Neighboring gene methionyl-tRNA formyltransferase Neighboring gene zinc metallopeptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_015687.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-function relationships within the peptide deformylase family. Evidence for a conserved architecture of the active site involving three conserved motifs and a metal ion. Meinnel T, et al. J Mol Biol, 1997 Apr 4. PMID 9126850
  2. Complete genome sequence of Clostridium acetobutylicum DSM 1731, a solvent-producing strain with multireplicon genome architecture. Bao G, et al. J Bacteriol, 2011 Sep. PMID 21742891, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
peptide deformylase
WP_010965029.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015687.1 Reference assembly

    Range
    1873149..1873601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_010965029.1 MULTISPECIES: peptide deformylase [Clostridium]

    See identical proteins and their annotated locations for WP_010965029.1

    UniProtKB/Swiss-Prot
    O05100
    UniProtKB/TrEMBL
    A0A2P8MK32
    Conserved Domains (1) summary
    PRK00150
    Location:1 → 144
    def; peptide deformylase; Reviewed
Nucleotide Protein
Heading Accession and Version