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acadsb acyl-CoA dehydrogenase short/branched chain [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 448259, updated on 4-Nov-2024

Summary

Official Symbol
acadsbprovided by Xenbase
Official Full Name
acyl-CoA dehydrogenase short/branched chainprovided by Xenbase
Primary source
Xenbase:XB-GENE-1005696
See related
Ensembl:ENSXETG00000009561 AllianceGenome:Xenbase:XB-GENE-1005696
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
acad7; sbcad; 2-mebcad
Summary
Predicted to enable acyl-CoA dehydrogenase activity and flavin adenine dinucleotide binding activity. Orthologous to human ACADSB (acyl-CoA dehydrogenase short/branched chain). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See acadsb in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (20154693..20171664, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (11851487..11867980, complement)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene H6 family homeobox 2 Neighboring gene H6 family homeobox 3 Neighboring gene IKAROS family zinc finger 5 Neighboring gene phosphoseryl-tRNA kinase Neighboring gene provisional ortholog of ADAM metallopeptidase domain 9

Genomic regions, transcripts, and products

General protein information

Preferred Names
short/branched chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-Coenzyme A dehydrogenase, short/branched chain
NP_001005724.1
XP_031760846.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001005724.1NP_001005724.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial

    See identical proteins and their annotated locations for NP_001005724.1

    Status: PROVISIONAL

    Source sequence(s)
    BC075324
    UniProtKB/TrEMBL
    A0A6I8PTL7, F6VPL3, Q6DJ59
    Related
    ENSXETP00000057783.3, ENSXETT00000057783.4
    Conserved Domains (2) summary
    TIGR03207
    Location:18355
    cyc_hxne_CoA_dh; cyclohexanecarboxyl-CoA dehydrogenase
    cd01158
    Location:18357
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    20154693..20171664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031904986.1XP_031760846.1  short/branched chain specific acyl-CoA dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6I8SM92, F6VPL3, Q28FB8
    Related
    ENSXETP00000098724.2, ENSXETT00000098185.2
    Conserved Domains (1) summary
    cd01158
    Location:56425
    SCAD_SBCAD; Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases