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fut1 fucosyltransferase 1 (H blood group) [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 447958, updated on 17-Aug-2024

Summary

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Official Symbol
fut1provided by Xenbase
Official Full Name
fucosyltransferase 1 (H blood group)provided by Xenbase
Primary source
Xenbase:XB-GENE-986117
See related
Ensembl:ENSXETG00000042151
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
hsc; alpha2-fucosyltransferase
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Genomic context

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See fut1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (114246372..114317185, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (106335796..106397400, complement)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene transmembrane protein 150B Neighboring gene lysine (K)-specific methyltransferase 5C Neighboring gene fibroblast growth factor 6 like Neighboring gene branched chain amino-acid transaminase 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
fucosyltransferase 1 (H blood group)
Names
H blood group)
alpha-2-fucosyltransferase
fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001004772.1 → NP_001004772.1  fucosyltransferase 1 (H blood group)

    See identical proteins and their annotated locations for NP_001004772.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ781410
    UniProtKB/TrEMBL
    Q6EV72
    Conserved Domains (1) summary
    cl16914
    Location:76 → 346
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    114246372..114317185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018095331.2 → XP_017950820.1  fucosyltransferase 1 (H blood group) isoform X1

    UniProtKB/TrEMBL
    Q6EV72
    Related
    ENSXETP00000101989.1, ENSXETT00000123037.1
    Conserved Domains (1) summary
    cl16914
    Location:76 → 346
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  2. XM_031904967.1 → XP_031760827.1  fucosyltransferase 1 (H blood group) isoform X1

    UniProtKB/TrEMBL
    Q6EV72
    Related
    ENSXETP00000102787.1, ENSXETT00000118930.1
    Conserved Domains (1) summary
    cl16914
    Location:76 → 346
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  3. XM_012966342.3 → XP_012821796.1  fucosyltransferase 1 (H blood group) isoform X1

    See identical proteins and their annotated locations for XP_012821796.1

    UniProtKB/TrEMBL
    Q6EV72
    Related
    ENSXETP00000105761.1, ENSXETT00000108914.1
    Conserved Domains (1) summary
    cl16914
    Location:76 → 346
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  4. XM_012966344.3 → XP_012821798.1  fucosyltransferase 1 (H blood group) isoform X1

    See identical proteins and their annotated locations for XP_012821798.1

    UniProtKB/TrEMBL
    Q6EV72
    Conserved Domains (1) summary
    cl16914
    Location:76 → 346
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins

  5. XM_012966341.3 → XP_012821795.1  fucosyltransferase 1 (H blood group) isoform X1

    See identical proteins and their annotated locations for XP_012821795.1

    UniProtKB/TrEMBL
    Q6EV72
    Related
    ENSXETP00000118833.1, ENSXETT00000123716.1
    Conserved Domains (1) summary
    cl16914
    Location:76 → 346
    O-FucT_like; GDP-fucose protein O-fucosyltransferase and related proteins
Nucleotide Protein Strain
Heading Accession and Version

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