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zdhhc20.S zinc finger, DHHC-type containing 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447788, updated on 17-Aug-2024

Summary

Official Symbol
zdhhc20.S
Official Full Name
zinc finger, DHHC-type containing 2 S homeolog
Primary source
Xenbase:XB-GENE-958740
Locus tag
XELAEV_18016233mg
See related
EnsemblRapid:ENSXLAG00005020426
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
zdhhc2; zdhhc20
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Genomic context

See zdhhc20.S in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
16
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (149810177..149847832)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (140816733..140853845)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor 9 S homeolog Neighboring gene mitochondrial calcium uptake 2 S homeolog Neighboring gene uncharacterized LOC121400706 Neighboring gene Sin3A associated protein 18kDa S homeolog Neighboring gene large tumor suppressor kinase 2 S homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC83315

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein-cysteine S-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger, DHHC-type containing 2 S homeolog
Names
zinc finger, DHHC domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094458.1NP_001087927.1  zinc finger, DHHC-type containing 2 S homeolog

    See identical proteins and their annotated locations for NP_001087927.1

    Status: PROVISIONAL

    Source sequence(s)
    BC078093
    UniProtKB/TrEMBL
    Q3KQE4, Q6AZE8
    Related
    ENSXLAP00005059813.1, ENSXLAT00005061263.1
    Conserved Domains (1) summary
    cl19890
    Location:9298
    zf-DHHC; DHHC palmitoyltransferase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    149810177..149847832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018248371.2XP_018103860.1  zinc finger, DHHC-type containing 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0UH54, Q3KQE4
  2. XM_018248370.2XP_018103859.1  zinc finger, DHHC-type containing 2 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0UH54, Q3KQE4
    Related
    ENSXLAP00005059786.1, ENSXLAT00005061235.1
  3. XM_018248372.2XP_018103861.1  zinc finger, DHHC-type containing 2 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A1L8HAP2, A0A974HWU8, Q3KQE4
  4. XM_018248373.2XP_018103862.1  zinc finger, DHHC-type containing 2 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A8J0UIK5, Q3KQE4
    Related
    ENSXLAP00005059805.1, ENSXLAT00005061254.1