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pgam2.S phosphoglycerate mutase 2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447767, updated on 4-Nov-2024

Summary

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Official Symbol
pgam2.S
Official Full Name
phosphoglycerate mutase 2 S homeolog
Primary source
Xenbase:XB-GENE-17339313
Locus tag
XELAEV_18020273mg
See related
EnsemblRapid:ENSXLAG00005019502 AllianceGenome:Xenbase:XB-GENE-17339313
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity; bisphosphoglycerate mutase activity; and hydrolase activity. Predicted to act upstream of or within glycolytic process. Human ortholog(s) of this gene implicated in myoglobinuria. Orthologous to human PGAM2 (phosphoglycerate mutase 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See pgam2.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (27030029..27036315)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (25962837..25969139)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase A (cyclophilin A) S homeolog Neighboring gene peptidyl-prolyl cis-trans isomerase Neighboring gene uncharacterized LOC121402130 Neighboring gene melanin-concentrating hormone receptor 1 Neighboring gene NudC domain containing 3 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC84250

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity IEA
Inferred from Electronic Annotation
more info
  
enables bisphosphoglycerate mutase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables intramolecular phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within glycolytic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
phosphoglycerate mutase 2 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094437.1 → NP_001087906.1  phosphoglycerate mutase 2 S homeolog

    See identical proteins and their annotated locations for NP_001087906.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082455
    UniProtKB/TrEMBL
    A0A974D6L0, Q640Y4
    Related
    ENSXLAP00005057288.1, ENSXLAT00005058635.1
    Conserved Domains (1) summary
    PRK14115
    Location:3 → 252
    gpmA; phosphoglyceromutase; Provisional

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    27030029..27036315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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