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lrrc14.L leucine rich repeat containing 14 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447755, updated on 4-Nov-2024

Summary

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Official Symbol
lrrc14.L
Official Full Name
leucine rich repeat containing 14 L homeolog
Primary source
Xenbase:XB-GENE-5844993
Locus tag
XELAEV_18032492mg
See related
EnsemblRapid:ENSXLAG00005024139 AllianceGenome:Xenbase:XB-GENE-5844993
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
lrrc14
Summary
Predicted to be located in cytoplasm. Orthologous to human LRRC14 (leucine rich repeat containing 14). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See lrrc14.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (162119259..162122978, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (152971666..152975385, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) L homeolog Neighboring gene provisional ortholog of N-acetyltransferase 2 L homeolog Neighboring gene E3 ubiquitin-protein ligase TRIM11 Neighboring gene ranBP-type and C3HC4-type zinc finger-containing protein 1 Neighboring gene cytochrome c-1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83741

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
leucine-rich repeat-containing protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094425.1 → NP_001087894.1  leucine-rich repeat-containing protein 14

    See identical proteins and their annotated locations for NP_001087894.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082440
    UniProtKB/Swiss-Prot
    Q640Z9
    UniProtKB/TrEMBL
    A0A974CQB6
    Related
    ENSXLAP00005071463.1, ENSXLAT00005073010.1
    Conserved Domains (3) summary
    cd00116
    Location:197 → 391
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:302 → 325
    LRR_RI; leucine-rich repeat [structural motif]
    sd00034
    Location:248 → 270
    LRR_AMN1; leucine-rich repeat [structural motif]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    162119259..162122978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q640Z9.1 GenPept UniProtKB/Swiss-Prot:Q640Z9

Gene LinkOut

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