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abraxas2.S abraxas 2, BRISC complex subunit S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447750, updated on 4-Nov-2024

Summary

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Official Symbol
abraxas2.S
Official Full Name
abraxas 2, BRISC complex subunit S homeolog
Primary source
Xenbase:XB-GENE-5771942
See related
EnsemblRapid:ENSXLAG00005012317 AllianceGenome:Xenbase:XB-GENE-5771942
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
abro1; fam175b; fam175b.L; abraxas2.L
Summary
Predicted to enable microtubule binding activity and polyubiquitin modification-dependent protein binding activity. Predicted to act upstream of or within cell division; nuclear chromosome segregation; and protein K63-linked deubiquitination. Predicted to be located in several cellular components, including cytoplasm; microtubule cytoskeleton; and nucleus. Orthologous to human ABRAXAS2 (abraxas 2, BRISC complex subunit). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See abraxas2.S in Genome Data Viewer
Location:
chromosome: 7S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7S NC_054384.1 (11488218..11507430, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (11471358..11490696, complement)

Chromosome 7S - NC_054384.1Genomic Context describing neighboring genes Neighboring gene 1.S Neighboring gene zinc finger RANBP2-type containing 1 S homeolog Neighboring gene EEF1A lysine methyltransferase 2 S homeolog Neighboring gene phospholysine phosphohistidine inorganic pyrophosphate phosphatase S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83343

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
  
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within attachment of spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
BRISC complex subunit Abro1
Names
abraxas 2, BRISC complex subunit L homeolog
family with sequence similarity 175 member B L homeolog
family with sequence similarity 175, member B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094420.1 → NP_001087889.2  BRISC complex subunit Abro1

    Status: PROVISIONAL

    Source sequence(s)
    BC082428
    UniProtKB/TrEMBL
    A0A8J0Q0E3
    Related
    ENSXLAP00005036132.1, ENSXLAT00005037032.1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054384.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    11488218..11507430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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