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sec14l5.S SEC14-like lipid binding 5 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447731, updated on 17-Aug-2024

Summary

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Official Symbol
sec14l5.S
Official Full Name
SEC14-like lipid binding 5 S homeolog
Primary source
Xenbase:XB-GENE-953438
Locus tag
XELAEV_18046744mg
See related
EnsemblRapid:ENSXLAG00005015352
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
sec14l5
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Genomic context

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Location:
chromosome: 9_10S
Exon count:
18
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (41230188..41255377)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (34595478..34618233)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 11 S homeolog Neighboring gene alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B S homeolog Neighboring gene small GTPase Ras-dva-2 S homeolog Neighboring gene uncharacterized LOC121398867

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC81931

General protein information

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Preferred Names
SEC14-like lipid binding 5 S homeolog
Names
SEC14-like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094401.1 → NP_001087870.1  SEC14-like lipid binding 5 S homeolog

    See identical proteins and their annotated locations for NP_001087870.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082398
    UniProtKB/TrEMBL
    A0A974H0X6, Q641D9
    Related
    ENSXLAP00005044981.1, ENSXLAT00005046080.1
    Conserved Domains (3) summary
    smart01100
    Location:256 → 301
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:326 → 490
    CRAL_TRIO; CRAL/TRIO domain
    pfam04707
    Location:17 → 173
    PRELI; PRELI-like family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    41230188..41255377
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041577823.1 → XP_041433757.1  SEC14-like lipid binding 5 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8EMY9, A0A974H0V8, A0A974H0X6
    Conserved Domains (3) summary
    smart01100
    Location:256 → 301
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:326 → 490
    CRAL_TRIO; CRAL/TRIO domain
    pfam04707
    Location:17 → 173
    PRELI; PRELI-like family

  2. XM_018237555.2 → XP_018093044.2  SEC14-like lipid binding 5 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8EMY9, A0A974H0V8, A0A974H0X6
    Conserved Domains (3) summary
    smart01100
    Location:256 → 301
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    pfam00650
    Location:326 → 490
    CRAL_TRIO; CRAL/TRIO domain
    pfam04707
    Location:17 → 173
    PRELI; PRELI-like family

  3. XM_041577824.1 → XP_041433758.1  SEC14-like lipid binding 5 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1LW76, A0A974H0X6
    Related
    ENSXLAP00005044996.1, ENSXLAT00005046095.1
    Conserved Domains (2) summary
    smart00516
    Location:319 → 491
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    smart01100
    Location:256 → 301
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
Nucleotide Protein Strain
Heading Accession and Version

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