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anapc7.S anaphase promoting complex subunit 7 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447726, updated on 4-Nov-2024

Summary

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Official Symbol
anapc7.S
Official Full Name
anaphase promoting complex subunit 7 S homeolog
Primary source
Xenbase:XB-GENE-17341085
Locus tag
XELAEV_18010652mg
See related
EnsemblRapid:ENSXLAG00005008450 AllianceGenome:Xenbase:XB-GENE-17341085
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to act upstream of or within cell division; positive regulation of mitotic metaphase/anaphase transition; and protein ubiquitination. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC7 (anaphase promoting complex subunit 7). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See anapc7.S in Genome Data Viewer
Location:
chromosome: 1S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (150973829..150991055, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (135196687..135213836, complement)

Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121399497 Neighboring gene ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 S homeolog Neighboring gene actin related protein 2/3 complex subunit 3 S homeolog Neighboring gene uncharacterized LOC108706441

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. Kırlı K, et al. Elife, 2015 Dec 17. PMID 26673895, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC81861

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within positive regulation of mitotic metaphase/anaphase transition IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of anaphase-promoting complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
anaphase promoting complex subunit 7 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094396.1 → NP_001087865.1  anaphase promoting complex subunit 7 S homeolog

    See identical proteins and their annotated locations for NP_001087865.1

    Status: PROVISIONAL

    Source sequence(s)
    BC082393
    UniProtKB/TrEMBL
    A0A974I1Z7, Q641E4
    Related
    ENSXLAP00005024424.1, ENSXLAT00005025132.1
    Conserved Domains (2) summary
    smart00028
    Location:339 → 370
    TPR; Tetratricopeptide repeats
    sd00006
    Location:338 → 368
    TPR; TPR repeat [structural motif]

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    150973829..150991055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041575832.1 → XP_041431766.1  anaphase promoting complex subunit 7 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1LRR1
    Conserved Domains (2) summary
    TIGR02917
    Location:173 → 474
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:303 → 333
    TPR; TPR repeat [structural motif]

  2. XM_041575831.1 → XP_041431765.1  anaphase promoting complex subunit 7 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1LSR9
    Conserved Domains (2) summary
    TIGR02917
    Location:99 → 370
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:304 → 334
    TPR; TPR repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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