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rsrc1.S arginine/serine-rich coiled-coil 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447603, updated on 18-Sep-2024

Summary

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Official Symbol
rsrc1.S
Official Full Name
arginine/serine-rich coiled-coil 1 S homeolog
Primary source
Xenbase:XB-GENE-5812627
Locus tag
XELAEV_18029756mg
See related
EnsemblRapid:ENSXLAG00005003381
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rsrc1; bm-011; sfrs21; srrp53
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Genomic context

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See rsrc1.S in Genome Data Viewer
Location:
chromosome: 5S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5S NC_054380.1 (102889843..103052251, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5S NC_030733.1 (96122425..96285601, complement)

Chromosome 5S - NC_054380.1Genomic Context describing neighboring genes Neighboring gene retinoic acid receptor responder (tazarotene induced) 1 S homeolog Neighboring gene elongation factor G, mitochondrial-like Neighboring gene latexin S homeolog Neighboring gene SHOX homeobox 2 S homeolog Neighboring gene solute carrier family 66 member 1 like S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC84816

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
arginine/serine-rich coiled-coil 1 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094310.1 → NP_001087779.1  arginine/serine-rich coiled-coil 1 S homeolog

    See identical proteins and their annotated locations for NP_001087779.1

    Status: PROVISIONAL

    Source sequence(s)
    BC081213
    UniProtKB/TrEMBL
    Q66IS9
    Related
    ENSXLAP00005010049.1, ENSXLAT00005010208.1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054380.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    102889843..103052251 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018264500.2 → XP_018119989.1  arginine/serine-rich coiled-coil 1 S homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0VJ44
    Related
    ENSXLAP00005010064.1, ENSXLAT00005010223.1

  2. XM_041564042.1 → XP_041419976.1  arginine/serine-rich coiled-coil 1 S homeolog isoform X3

    UniProtKB/TrEMBL
    A0A8J1KRP9
    Related
    ENSXLAP00005010058.1, ENSXLAT00005010217.1

  3. XM_041564040.1 → XP_041419974.1  arginine/serine-rich coiled-coil 1 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1KRQ6
    Related
    ENSXLAP00005010055.1, ENSXLAT00005010214.1

  4. XM_018264503.2 → XP_018119992.1  arginine/serine-rich coiled-coil 1 S homeolog isoform X4

    UniProtKB/TrEMBL
    A0A8J0VAL0
    Related
    ENSXLAP00005010066.1, ENSXLAT00005010225.1

  5. XM_041564041.1 → XP_041419975.1  arginine/serine-rich coiled-coil 1 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1KRQ6
Nucleotide Protein Strain
Heading Accession and Version

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