U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sntg2.L syntrophin, gamma 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447597, updated on 4-Nov-2024

Summary

Official Symbol
sntg2.L
Official Full Name
syntrophin, gamma 2 L homeolog
Primary source
Xenbase:XB-GENE-988145
Locus tag
XELAEV_18028003mg
See related
EnsemblRapid:ENSXLAG00005029107 AllianceGenome:Xenbase:XB-GENE-988145
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
sntg2
Summary
Predicted to enable structural molecule activity. Predicted to be located in cytoskeleton. Predicted to be part of dystrophin-associated glycoprotein complex. Orthologous to human SNTG2 (syntrophin gamma 2). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See sntg2.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
17
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (144716008..145006375)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (133636680..133928163)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 18 L homeolog Neighboring gene centrosomal protein 19kDa L homeolog Neighboring gene peroxidasin L homeolog Neighboring gene myelin transcription factor 1 like L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
syntrophin, gamma 2 L homeolog

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094304.1NP_001087773.1  syntrophin, gamma 2 L homeolog

    See identical proteins and their annotated locations for NP_001087773.1

    Status: PROVISIONAL

    Source sequence(s)
    BC081204
    UniProtKB/TrEMBL
    A0A974CYM3, A0A974HIA7, Q66IT5
    Related
    ENSXLAP00005086856.1, ENSXLAT00005088518.1
    Conserved Domains (2) summary
    smart00233
    Location:297421
    PH; Pleckstrin homology domain
    cd00992
    Location:72152
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    144716008..145006375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041562254.1XP_041418188.1  syntrophin, gamma 2 L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J1KN84, A0A974HIA7
    Conserved Domains (2) summary
    smart00233
    Location:294418
    PH; Pleckstrin homology domain
    cd00992
    Location:71151
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
  2. XM_041562253.1XP_041418187.1  syntrophin, gamma 2 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1KLI4, A0A974HIA7
    Related
    ENSXLAP00005086939.1, ENSXLAT00005088601.1
    Conserved Domains (2) summary
    smart00233
    Location:296420
    PH; Pleckstrin homology domain
    cd00992
    Location:71151
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...