pltp.S phospholipid transfer protein S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: pltp.S
Official Full Name: phospholipid transfer protein S homeolog
Primary source: Xenbase:XB-GENE-981867
Locus tag: XELAEV_18046539mg
See related: EnsemblRapid:ENSXLAG00005034975
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: pltp
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Genomic context

Location:: chromosome: 9_10S

Exon count:: 16

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10S	NC_054388.1 (32027569..32042583, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10S	NC_030741.1 (26554151..26569165, complement)

Chromosome 9_10S - NC_054388.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ceramide binding	IEA Inferred from Electronic Annotation more info
enables ceramide transfer activity	IEA Inferred from Electronic Annotation more info
enables diacylglycerol binding	IEA Inferred from Electronic Annotation more info
enables lipid binding	IEA Inferred from Electronic Annotation more info
enables phosphatidic acid binding	IEA Inferred from Electronic Annotation more info
enables phosphatidic acid transfer activity	IEA Inferred from Electronic Annotation more info
enables phosphatidylcholine binding	IEA Inferred from Electronic Annotation more info
enables phosphatidylcholine transporter activity	IEA Inferred from Electronic Annotation more info
enables phosphatidylethanolamine binding	IEA Inferred from Electronic Annotation more info
enables phosphatidylethanolamine transfer activity	IEA Inferred from Electronic Annotation more info
enables phosphatidylglycerol binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within ceramide transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within high-density lipoprotein particle remodeling	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within phospholipid transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in extracellular space	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: phospholipid transfer protein S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094298.1 → NP_001087767.2 phospholipid transfer protein S homeolog precursor

Status: PROVISIONAL

Source sequence(s)

BC081189

UniProtKB/TrEMBL

A0A8J0Q0R0, A0A974H0P3

Related

ENSXLAP00005104595.1, ENSXLAT00005106624.1

Conserved Domains (2) summary

cd00025
Location:25 → 243

BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...

cl00188
Location:234 → 468

BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

32027569..32042583 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)