cisd1.S CDGSH iron sulfur domain 1 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cisd1.S
Official Full Name: CDGSH iron sulfur domain 1 S homeolog
Primary source: Xenbase:XB-GENE-6253768
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: zcd1; cisd1; cisd1a; cisd1-a; cisd1-b; cisd1.L; mitoneet
Annotation information: Annotation category: partial on reference assembly
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Genomic context

Location:: chromosome: 7S

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	7S	NC_054384.1 (7556083..7563328)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	Unplaced Scaffold	NW_016718635.1 (126..332, complement)

Chromosome 7S - NC_054384.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables 2 iron, 2 sulfur cluster binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of autophagy	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: CDGSH iron sulfur domain 1 S homeolog

Names: CDGSH iron sulfur domain 1 L homeolog; CDGSH iron sulfur domain 1 a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094218.1 → NP_001087687.1 CDGSH iron sulfur domain 1 S homeolog

See identical proteins and their annotated locations for NP_001087687.1

Status: PROVISIONAL

Source sequence(s)

BC081083

UniProtKB/TrEMBL

Q66J28

Conserved Domains (1) summary

smart00704
Location:50 → 88

ZnF_CDGSH; CDGSH-type zinc finger. Function unknown