rnf167.S ring finger protein 167 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rnf167.S
Official Full Name: ring finger protein 167 S homeolog
Primary source: Xenbase:XB-GENE-6253879
Locus tag: XELAEV_18001014mg
See related: EnsemblRapid:ENSXLAG00005009332 AllianceGenome:Xenbase:XB-GENE-6253879
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rnf167
Summary: Predicted to enable zinc ion binding activity. Predicted to be located in endomembrane system and membrane. Orthologous to human RNF167 (ring finger protein 167). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3S

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3S	NC_054376.1 (130291003..130300835)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	Unplaced Scaffold	NW_016694811.1 (6608840..6616034)

Chromosome 3S - NC_054376.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables zinc ion binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in endomembrane system	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ring finger protein 167 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094128.1 → NP_001087597.1 ring finger protein 167 S homeolog precursor

See identical proteins and their annotated locations for NP_001087597.1

Status: PROVISIONAL

Source sequence(s)

BC080409

UniProtKB/TrEMBL

Q66KG3

Related

ENSXLAP00005027188.1, ENSXLAT00005027920.1

Conserved Domains (2) summary

cd02123
Location:17 → 172

PA_C_RZF_like; PA_C-RZF_ like: Protease-associated (PA) domain C_RZF-like. This group includes various PA domain-containing proteins similar to C-RZF (chicken embryo RING zinc finger) protein. These proteins contain a C3H2C3 RING finger. C-RZF is expressed in embryo ...

pfam13639
Location:230 → 274

zf-RING_2; Ring finger domain