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slc25a29.L solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447403, updated on 4-Nov-2024

Summary

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Official Symbol
slc25a29.L
Official Full Name
solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 L homeolog
Primary source
Xenbase:XB-GENE-5763840
Locus tag
XELAEV_18039687mg
See related
EnsemblRapid:ENSXLAG00005017596 AllianceGenome:Xenbase:XB-GENE-5763840
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
slc25a29
Summary
Predicted to enable high-affinity L-arginine transmembrane transporter activity. Predicted to act upstream of or within mitochondrial L-ornithine transmembrane transport. Predicted to be located in membrane and mitochondrion. Orthologous to human SLC25A29 (solute carrier family 25 member 29). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See slc25a29.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (87575199..87594156, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (72884538..72903674, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene delta(4)-desaturase, sphingolipid 2 L homeolog Neighboring gene YY1 transcription factor L homeolog Neighboring gene solute carrier family 25 member 47 L homeolog Neighboring gene tryptophanyl-tRNA synthetase 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC81556

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 L homeolog
Names
solute carrier family 25, member 29

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094110.1 → NP_001087579.1  solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 L homeolog

    See identical proteins and their annotated locations for NP_001087579.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080378
    UniProtKB/TrEMBL
    Q66KI7
    Related
    ENSXLAP00005051986.1, ENSXLAT00005053147.1
    Conserved Domains (1) summary
    pfam00153
    Location:138 → 217
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    87575199..87594156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018229032.2 → XP_018084521.1  solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8FA24, A0A974H869
    Related
    ENSXLAP00005051974.1, ENSXLAT00005053136.1

  2. XM_018229033.2 → XP_018084522.1  solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 L homeolog isoform X2

    UniProtKB/TrEMBL
    Q66KI7
    Related
    ENSXLAP00005051991.1, ENSXLAT00005053152.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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