myl6.L myosin light chain 6 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: myl6.L
Official Full Name: myosin light chain 6 L homeolog
Primary source: Xenbase:XB-GENE-5931845
Locus tag: XELAEV_18013364mg
See related: EnsemblRapid:ENSXLAG00005007669 AllianceGenome:Xenbase:XB-GENE-5931845
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: myl6
Summary: Predicted to enable calcium ion binding activity. Predicted to be a structural constituent of muscle. Predicted to be part of myosin II complex. Orthologous to human MYL6 (myosin light chain 6). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 2L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	2L	NC_054373.1 (144385490..144392213, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	2L	NC_030726.1 (138508631..138515642, complement)

Chromosome 2L - NC_054373.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info
enables structural constituent of muscle	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of myosin II complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: myosin light chain 6 L homeolog

Names: myosin, light chain 6, alkali, smooth muscle and non-muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094104.1 → NP_001087573.1 myosin light chain 6 L homeolog

See identical proteins and their annotated locations for NP_001087573.1

Status: PROVISIONAL

Source sequence(s)

BC100212

UniProtKB/TrEMBL

A0A974DJG4, A0A974DRH6, Q498H8

Related

ENSXLAP00005021851.1, ENSXLAT00005022542.1

Conserved Domains (3) summary

PTZ00184
Location:5 → 150

PTZ00184; calmodulin; Provisional

cd00051
Location:88 → 148

EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

pfam16305
Location:23 → 107

DUF4947; Domain of unknown function (DUF4947)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

144385490..144392213 complement

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GenBank, FASTA, Sequence Viewer (Graphics)