dctn4.L dynactin subunit 4 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: dctn4.L
Official Full Name: dynactin subunit 4 L homeolog
Primary source: Xenbase:XB-GENE-866101
Locus tag: XELAEV_18016920mg
See related: EnsemblRapid:ENSXLAG00005001575 AllianceGenome:Xenbase:XB-GENE-866101
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: dctn4
Summary: Predicted to be located in centrosome; sarcomere; and stress fiber. Predicted to be part of dynactin complex. Orthologous to human DCTN4 (dynactin subunit 4). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3L

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (26984174..27002380, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (14067209..14085888, complement)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Component	Evidence Code	Pubs
located_in centrosome	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
part_of dynactin complex	IEA Inferred from Electronic Annotation more info
located_in sarcomere	IEA Inferred from Electronic Annotation more info
located_in stress fiber	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: dynactin subunit 4 L homeolog

Names: dynactin 4 (p62)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094093.1 → NP_001087562.1 dynactin subunit 4 L homeolog

See identical proteins and their annotated locations for NP_001087562.1

Status: PROVISIONAL

Source sequence(s)

BC080106

UniProtKB/TrEMBL

Q68EU4

Related

ENSXLAP00005004722.1, ENSXLAT00005004819.1

Conserved Domains (1) summary

pfam05502
Location:23 → 332

Dynactin_p62; Dynactin p62 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

26984174..27002380 complement

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GenBank, FASTA, Sequence Viewer (Graphics)