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rwdd1.L RWD domain containing 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447366, updated on 4-Nov-2024

Summary

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Official Symbol
rwdd1.L
Official Full Name
RWD domain containing 1 L homeolog
Primary source
Xenbase:XB-GENE-1006390
Locus tag
XELAEV_18027144mg
See related
EnsemblRapid:ENSXLAG00005033879 AllianceGenome:Xenbase:XB-GENE-1006390
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rwdd1; rwdd1-a
Summary
Predicted to act upstream of or within cytoplasmic translation. Orthologous to human RWDD1 (RWD domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See rwdd1.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (78069194..78080883, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 5L NC_030732.1 (75848323..75860132, complement)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121393533 Neighboring gene amine sulfotransferase Neighboring gene arylsulfatase A, gene 1 L homeolog Neighboring gene calcium homeostasis modulator family member 4 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC84211

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
RWD domain containing 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094073.1 → NP_001087542.1  RWD domain containing 1 L homeolog

    See identical proteins and their annotated locations for NP_001087542.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080086
    UniProtKB/TrEMBL
    A0A974CVR2, Q68EW4
    Related
    ENSXLAP00005101210.1, ENSXLAT00005103184.1
    Conserved Domains (1) summary
    pfam05773
    Location:3 → 111
    RWD; RWD domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    78069194..78080883 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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