med11.S mediator complex subunit 11 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: med11.S
Official Full Name: mediator complex subunit 11 S homeolog
Primary source: Xenbase:XB-GENE-6253996
Locus tag: XELAEV_18009829mg
See related: EnsemblRapid:ENSXLAG00005014935 AllianceGenome:Xenbase:XB-GENE-6253996
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: med11
Summary: Predicted to enable transcription coregulator activity. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED11 (mediator complex subunit 11). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 1S

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (92424762..92440600, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1S	NC_030725.1 (87132655..87148733, complement)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables transcription coregulator activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of mediator complex	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: mediator of RNA polymerase II transcription subunit 11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094071.1 → NP_001087540.1 mediator of RNA polymerase II transcription subunit 11

See identical proteins and their annotated locations for NP_001087540.1

Status: PROVISIONAL

Source sequence(s)

BC080083

UniProtKB/Swiss-Prot

Q68EW7

UniProtKB/TrEMBL

A0A974DUA0

Related

ENSXLAP00005043733.1, ENSXLAT00005044804.1

Conserved Domains (1) summary

pfam10280
Location:8 → 115

Med11; Mediator complex protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

92424762..92440600 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_018237865.2 → XP_018093354.1 mediator of RNA polymerase II transcription subunit 11 isoform X1

UniProtKB/Swiss-Prot

Q68EW7

UniProtKB/TrEMBL

A0A974DUA0