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pdap1.L PDGFA associated protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447341, updated on 17-Aug-2024

Summary

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Official Symbol
pdap1.L
Official Full Name
PDGFA associated protein 1 L homeolog
Primary source
Xenbase:XB-GENE-6254004
See related
EnsemblRapid:ENSXLAG00005025674
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pdap1; haspp28; pdap1.S
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Genomic context

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Location:
chromosome: 9_10L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (95659660..95674611, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (85081299..85096250, complement)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene cleavage and polyadenylation specific factor 4 L homeolog Neighboring gene pentatricopeptide repeat domain 1 L homeolog Neighboring gene BUD31 homolog L homeolog Neighboring gene actin related protein 2/3 complex subunit 1B L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC83384

General protein information

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Preferred Names
PDGFA associated protein 1 L homeolog
Names
PDGFA associated protein 1 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094048.1 → NP_001087517.1  PDGFA associated protein 1 L homeolog

    See identical proteins and their annotated locations for NP_001087517.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080049
    UniProtKB/TrEMBL
    Q68EZ8
    Related
    ENSXLAP00005076323.1, ENSXLAT00005077914.1
    Conserved Domains (1) summary
    pfam10252
    Location:81 → 146
    PP28; Casein kinase substrate phosphoprotein PP28

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    95659660..95674611 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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