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slc25a28.L solute carrier family 25 member 28 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447330, updated on 4-Nov-2024

Summary

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Official Symbol
slc25a28.L
Official Full Name
solute carrier family 25 member 28 L homeolog
Primary source
Xenbase:XB-GENE-6254008
Locus tag
XELAEV_18034722mg
See related
AllianceGenome:Xenbase:XB-GENE-6254008
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
mfrn2; mrs4l; mrs3/4; npd016; mfrn2-b; slc25a28-a; slc25a28-b
Summary
Predicted to enable ferrous iron transmembrane transporter activity. Predicted to act upstream of or within iron import into the mitochondrion. Predicted to be located in mitochondrial inner membrane. Orthologous to human SLC25A28 (solute carrier family 25 member 28). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See slc25a28.L in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (31461727..31470277, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (29935054..29943604, complement)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene NK2 homeobox 3 L homeolog Neighboring gene NK3 homeobox 2 L homeolog Neighboring gene mitoferrin-2-like Neighboring gene ectonucleoside triphosphate diphosphohydrolase 7 L homeolog Neighboring gene cytochrome c oxidase assembly homolog COX15 L homeolog Neighboring gene protein kinase C delta type-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC82864

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ferrous iron transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within iron import into the mitochondrion IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within iron ion transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
mitoferrin-2B
Names
mitochondrial iron transporter 2-B
solute carrier family 25 (mitochondrial iron transporter), member 28 L homeolog
solute carrier family 25 member 28-B
solute carrier family 25, member 28

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001094037.1 → NP_001087506.1  mitoferrin-2B

    See identical proteins and their annotated locations for NP_001087506.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080028
    UniProtKB/Swiss-Prot
    Q68F18
    Conserved Domains (1) summary
    pfam00153
    Location:75 → 166
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    31461727..31470277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q68F18.1 GenPept UniProtKB/Swiss-Prot:Q68F18

Gene LinkOut

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Molecular Biology Databases
Research Materials