ldaf1.L lipid droplet assembly factor 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: ldaf1.L
Official Full Name: lipid droplet assembly factor 1 L homeolog
Primary source: Xenbase:XB-GENE-6254011
Locus tag: XELAEV_18045346mg
See related: EnsemblRapid:ENSXLAG00005019667
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: ldaf1-a; tmem159; promethin; tmem159-a; tmem159-b; tmem159.L
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Genomic context

Location:: chromosome: 9_10L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	9_10L	NC_054387.1 (111846197..111880097, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	9_10L	NC_030740.1 (101247138..101279854, complement)

Chromosome 9_10L - NC_054387.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within lipid droplet formation	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum membrane	ISS Inferred from Sequence or Structural Similarity more info
located_in lipid droplet	IEA Inferred from Electronic Annotation more info
located_in lipid droplet	ISS Inferred from Sequence or Structural Similarity more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: lipid droplet assembly factor 1-A

Names: promethin-A; transmembrane protein 159 L homeolog; transmembrane protein 159-A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001094027.1 → NP_001087496.1 lipid droplet assembly factor 1-A

See identical proteins and their annotated locations for NP_001087496.1

Status: PROVISIONAL

Source sequence(s)

BC080012

UniProtKB/Swiss-Prot

Q68F33

UniProtKB/TrEMBL

A0A1L8EY10, A0A974C0A5

Related

ENSXLAP00005057754.1, ENSXLAT00005059109.1

Conserved Domains (1) summary

pfam16015
Location:40 → 126

Promethin

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

111846197..111880097 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041575675.1 → XP_041431609.1 lipid droplet assembly factor 1-A isoform X1

UniProtKB/Swiss-Prot

Q68F33

UniProtKB/TrEMBL

A0A1L8EY10, A0A974C0A5

Conserved Domains (1) summary

pfam16015
Location:40 → 126

Promethin