csrp2.L cysteine and glycine rich protein 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: csrp2.L
Official Full Name: cysteine and glycine rich protein 2 L homeolog
Primary source: Xenbase:XB-GENE-943918
See related: EnsemblRapid:ENSXLAG00005002262 AllianceGenome:Xenbase:XB-GENE-943918
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: crp2; lmo5; csrp2; smlim; csrp2-a; csrp2-b
Summary: Predicted to enable metal ion binding activity. Predicted to act upstream of or within actin cytoskeleton organization. Predicted to be located in cytoplasm and nucleus. Orthologous to human CSRP2 (cysteine and glycine rich protein 2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 3L

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (68312391..68332798, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (52989324..53009855, complement)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within actin cytoskeleton organization	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: cysteine and glycine rich protein 2 L homeolog

Names: cysteine and glycine-rich protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093973.1 → NP_001087442.1 cysteine and glycine rich protein 2 L homeolog

See identical proteins and their annotated locations for NP_001087442.1

Status: PROVISIONAL

Source sequence(s)

BC079792

UniProtKB/TrEMBL

Q68FI9

Related

ENSXLAP00005006817.1, ENSXLAT00005006927.1

Conserved Domains (2) summary

cd09480
Location:9 → 63

LIM1_CRP2; The first LIM domain of Cysteine Rich Protein 2 (CRP2)

cd09840
Location:118 → 171

LIM2_CRP2; The second LIM domain of Cysteine Rich Protein 2 (CRP2)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

68312391..68332798 complement

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GenBank, FASTA, Sequence Viewer (Graphics)