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efcab14.S EF-hand calcium binding domain 14 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 447197, updated on 17-Aug-2024

Summary

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Official Symbol
efcab14.S
Official Full Name
EF-hand calcium binding domain 14 S homeolog
Primary source
Xenbase:XB-GENE-5791206
Locus tag
XELAEV_18025245mg
See related
EnsemblRapid:ENSXLAG00005023210
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
efcab14; kiaa0494
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Genomic context

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See efcab14.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (73826231..73844066, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (67608903..67626794, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene ATP synthase mitochondrial F1 complex assembly factor 1 S homeolog Neighboring gene cyclin B1 S homeolog Neighboring gene pdzk1 interacting protein 1 S homeolog Neighboring gene uncharacterized LOC108715585

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC80252

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
EF-hand calcium binding domain 14 S homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001093904.1 → NP_001087373.1  EF-hand calcium binding domain 14 S homeolog

    See identical proteins and their annotated locations for NP_001087373.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079685
    UniProtKB/TrEMBL
    A0A974HLX8, Q6AXA8
    Related
    ENSXLAP00005068503.1, ENSXLAT00005070038.1
    Conserved Domains (1) summary
    TIGR04523
    Location:116 → 366
    Mplasa_alph_rch; helix-rich Mycoplasma protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    73826231..73844066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018259647.2 → XP_018115136.1  EF-hand calcium binding domain 14 S homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8GG31, A0A974D1L1
    Related
    ENSXLAP00005068482.1, ENSXLAT00005070017.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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